MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
19428wC1_HT5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 69
bases: 2,919,115 bps
CDS: 2,930
rRNA: 8
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,999
Total number of protein coding genes annotated/found:
2,930
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5035|JADGLE010000010.1
SEQF5035_00001
Genome Viewer
NA
AA
939/313
1088-150
1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
SEQF5035|JADGLE010000010.1
SEQF5035_00002
Genome Viewer
NA
AA
1353/451
1276-2628
Salicylate biosynthesis isochorismate synthase
SEQF5035|JADGLE010000010.1
SEQF5035_00003
Genome Viewer
NA
AA
1680/560
2631-4310
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
SEQF5035|JADGLE010000010.1
SEQF5035_00004
Genome Viewer
NA
AA
825/275
4291-5115
2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
SEQF5035|JADGLE010000010.1
SEQF5035_00005
Genome Viewer
NA
AA
819/273
5091-5909
1%2C4-dihydroxy-2-naphthoyl-CoA synthase
SEQF5035|JADGLE010000010.1
SEQF5035_00006
Genome Viewer
NA
AA
1605/535
7605-6001
Protein RocB
SEQF5035|JADGLE010000010.1
SEQF5035_00007
Genome Viewer
NA
AA
1158/386
8778-7621
putative N-acetyl-LL-diaminopimelate aminotransferase
SEQF5035|JADGLE010000010.1
SEQF5035_00008
Genome Viewer
NA
AA
537/179
8906-9442
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00009
Genome Viewer
NA
AA
1002/334
10509-9508
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00010
Genome Viewer
NA
AA
4065/1355
14865-10801
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00011
Genome Viewer
NA
AA
423/141
15415-14993
Acetyltransferase
SEQF5035|JADGLE010000010.1
SEQF5035_00012
Genome Viewer
NA
AA
474/158
16025-15552
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00013
Genome Viewer
NA
AA
1269/423
17309-16041
Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
SEQF5035|JADGLE010000010.1
SEQF5035_00014
Genome Viewer
NA
AA
849/283
17532-18380
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase
SEQF5035|JADGLE010000010.1
SEQF5035_00015
Genome Viewer
NA
AA
1371/457
18515-19885
putative acyl--CoA ligase YhfT
SEQF5035|JADGLE010000010.1
SEQF5035_00016
Genome Viewer
NA
AA
1149/383
19867-21015
Putative acetyl-CoA C-acetyltransferase YhfS
SEQF5035|JADGLE010000010.1
SEQF5035_00017
Genome Viewer
NA
AA
372/124
20978-21349
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00018
Genome Viewer
NA
AA
252/84
21349-21600
hypothetical protein
SEQF5035|JADGLE010000010.1
SEQF5035_00019
Genome Viewer
NA
AA
795/265
22590-21796
Teichoic acids export ATP-binding protein TagH
SEQF5035|JADGLE010000010.1
SEQF5035_00020
Genome Viewer
NA
AA
804/268
22795-23598
Teichoic acid translocation permease protein TagG
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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